Usually, this error indicates that a directory being transfered or one of its subdirectories was deleted while the PutFiles or GetFiles was in progress.
However, from the communication log you sent to support@rebex.net, this appears to be caused by a duplicit "226 Transfer finished successfully" response sent by the FTP server. Two identical responses instead of one confused the MLST command that was used to determine whether a directory to be transfered still exisst. We have not encountered this before - do you know which FTP server is this?
Enabling an option that causes the FTP control connection to be flushed before sending each command should help:
C#:
client.Options |= FtpOptions.EnableControlConnectionFlushing;
VB.NET:
client.Options = client.Options Or FtpOptions.EnableControlConnectionFlushing
(where "client" is an instance of Ftp object)
This should solve the issue.
Note: It looks like this option has a side effect that causes a noticeable slowdown of the FTP control connection. We will try addressing this in the next release. (If you would like a beta when it's ready, please let us know.)